BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031E01SP1|AL429400
(869 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig63 682 0.0
3x_Contig1805 465 e-131
3x_Contig1806 396 e-110
3x_Contig33 246 7e-65
3x_Contig1790 235 8e-62
3x_Contig1585 183 6e-46
3x_Contig1560 173 7e-43
3x_Contig1803 142 1e-33
3x_Contig1701 140 4e-33
3x_Contig577 124 3e-28
3x_Contig1802 120 6e-27
3x_Contig1796 114 4e-25
3x_Contig1213 110 6e-24
>3x_Contig63
Length = 856
Score = 682 bits (336), Expect = 0.0
Identities = 347/356 (97%)
Strand = Plus / Plus
Query: 514 ctaccaaatatgatgaatatccattccaacaattataaacattatacctatcgtccaagg 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctaccaaatatgatgaatatccattccaacaattataaacattatacctatcgtccaagg 61
Query: 574 tcccgtcgtgatcagtagcactaaaagctgggaattattctatttctttgccaamaatma 633
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 62 tcccgtcgtgatcagtagcactaaaagctgggaattattctatttctttgccaacaatca 121
Query: 634 taagacataaaagacatctagatacattataaatgcggacattaaaacatgttgcaagtg 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 taagacataaaagacatctagatacattataaatgcggacattaaaacatgttgcaagtg 181
Query: 694 aagcatatmggccagckacaaacctgtacaatacgaggttttcttcacgtcgaaaaattc 753
|||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 182 aagcatatcggccagctacaaacctgtccaatacgaggttttcttcacgtcgaaaaattc 241
Query: 754 actcagcacaatgccatcggaagakgtkcctmccaagactttgtactgaccagcttctga 813
|||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||
Sbjct: 242 actcagcacaatgccatcggaagatgtgcctaccaagactttgtactgaccagcttctga 301
Query: 814 acaccacttaccgacttcttcatcaaagaaggaaatagagtmcttcaagattaaat 869
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 302 acaccacttaccgacttcttcatcaaagaaggaaatagagtccttcaagattaaat 357
>3x_Contig1805
Length = 19369
Score = 465 bits (229), Expect = e-131
Identities = 260/277 (93%)
Strand = Plus / Minus
Query: 9 tctcttccccaatctattccgacaagcacwccgtgatgtgccgagaccccgaatctwcgg 68
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 320 tctcttccccaatctattccgacaagcacaccgtgatgtgccgagaccccgaatctacgg 261
Query: 69 ccagttttaccctgaacmgatgggtttccctatactctcmtattatctgtatttgacatc 128
||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 260 ccagtgttaccctgaacagatgggtttccctatactctcatattatctgtatttgacatc 201
Query: 129 aattgcctatttwctatccgtttgttgttccctggcgttgtwggagctcttctaaggcgc 188
|||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 200 aattgcctatttactatccgtttgttgttccctggcgttgtaggagcacttctaaggcgc 141
Query: 189 cagttattgawccaatgctawatwagaagctgaagctgagacgaactaggrtcraggctg 248
|||||||||| ||||||||| || |||| ||||||||||||||||||||| || |||||
Sbjct: 140 cagttattgaaccaatgctagataagaatctgaagctgagacgaactaggatcaaggcta 81
Query: 249 ctgcgtttggtgattggaagcccaatctgaaaagtat 285
| || ||||||||||||||||||||||||||||||||
Sbjct: 80 cagcttttggtgattggaagcccaatctgaaaagtat 44
>3x_Contig1806
Length = 53694
Score = 396 bits (195), Expect = e-110
Identities = 250/273 (91%)
Strand = Plus / Minus
Query: 597 aaagctgggaattattctatttctttgccaamaatmataagacataaaagacatctagat 656
|||||||| ||||||||||||||||| | || ||| ||| ||||||||||||||||||||
Sbjct: 52818 aaagctggaaattattctatttctttactaaaaatcatacgacataaaagacatctagat 52759
Query: 657 acattataaatgcggacattaaaacatgttgcaagtgaagcatatmggccagckacaaac 716
|| ||||||||| ||||| |||||||||||||||||||||| ||| ||||| | ||||||
Sbjct: 52758 actttataaatgtggacagtaaaacatgttgcaagtgaagcgtattggccaactacaaac 52699
Query: 717 ctgtacaatacgaggttttcttcacgtcgaaaaattcactcagcacaatgccatcggaag 776
|||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||
Sbjct: 52698 ctgtccaatacgaggttttcttcacgtcgaaagattcactcagcacaatgtcatctgaag 52639
Query: 777 akgtkcctmccaagactttgtactgaccagcttctgaacaccacttaccgacttcttcat 836
| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52638 atgtgcctaccaagactttgtactgaccagcttctgaacaccacttaccgacttcttcat 52579
Query: 837 caaagaaggaaatagagtmcttcaagattaaat 869
| |||||||||||||| | ||||||||||||||
Sbjct: 52578 cgaagaaggaaatagaatccttcaagattaaat 52546
Score = 160 bits (79), Expect = 3e-39
Identities = 216/267 (80%), Gaps = 4/267 (1%)
Strand = Plus / Minus
Query: 151 tgttgttccctggcgttgtwggagctcttctaaggcgccagttattgawccaatgctawa 210
|||||||| |||||||||| ||||| ||||||||||||||||||||| ||||||||| |
Sbjct: 41704 tgttgttctctggcgttgtaggagcatttctaaggcgccagttattgaaccaatgctaga 41645
Query: 211 twagaagctgaagctgagacgaactaggrtcraggctgctgcgtttggtgattggaagcc 270
| ||||| ||||| |||| ||||| | || ||||| | ||||||| ||| | |||| |
Sbjct: 41644 taagaagttgaagttgagtgcaactatgatcgaggctacagcgtttgatgaatcgaagac 41585
Query: 271 caatctgaaaagtatathagtwgatggtttcttcmtcca-atttcccmtctggatttgac 329
||||| ||||||||| || |||||||| |||| |||||| | |||||| |
Sbjct: 41584 caatccaaaaagtatacagccagagtgtttcttcatccagttttcccatttggatt---c 41528
Query: 330 gacatattamttactgttctacactaacttatatgttagatgttagayaccmaggagaac 389
||||||||| ||| ||||||||| | ||||||||| |||||| ||| ||| ||||||||
Sbjct: 41527 gacatattagttattgttctacattggcttatatgtcagatgtaagaaaccaaggagaac 41468
Query: 390 accgtaagtygtttacttaactwgtcg 416
||||||||| ||||||||||| ||||
Sbjct: 41467 accgtaagtaatttacttaactagtcg 41441
>3x_Contig33
Length = 834
Score = 246 bits (121), Expect = 7e-65
Identities = 226/263 (85%), Gaps = 1/263 (0%)
Strand = Plus / Plus
Query: 608 ttattctatttctttgccaamaatmataagacataaaagacatctagatacattataaat 667
||||||||||||||| | || ||| |||||||||||||||||||||| ||||||||||||
Sbjct: 214 ttattctatttctttactaaaaatcataagacataaaagacatctagttacattataaat 273
Query: 668 gcggacattaaaacatgttgcaagtgaagcatatmggccagckacaaacctgtacaatac 727
| ||||| | ||||||||| | | || | ||| | || | ||||||||| || ||
Sbjct: 274 gtggacagtgaaacatgtttgtaattaaccgtattgctcaactacaaacctgaccagtaa 333
Query: 728 gaggttttcttcacgtcgaaaaattcactcagcacaatgccatcggaagakgtkcctmcc 787
|||||||||| |||||||||| |||||||||| |||||| |||||||||| || ||| ||
Sbjct: 334 gaggttttctccacgtcgaaagattcactcaggacaatgtcatcggaagaagtacctacc 393
Query: 788 aagactt-tgtactgaccagcttctgaacaccacttaccgacttcttcatcaaagaagga 846
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 394 aagacttgtgtactgaccagcttctgaacaccacttaccgacttcttcatcgaagaagga 453
Query: 847 aatagagtmcttcaagattaaat 869
| ||||| |||||||| |||||
Sbjct: 454 gacagagtccttcaagactaaat 476
>3x_Contig1790
Length = 27369
Score = 235 bits (116), Expect = 8e-62
Identities = 248/295 (84%), Gaps = 3/295 (1%)
Strand = Plus / Plus
Query: 253 gtttggtgattggaagcccaatctgaaaagtatathagtwgatggtttcttcmtccaa-t 311
|||||||||||| |||||||||||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 5017 gtttggtgattgaaagcccaatctgaaaagtatataagtagatggtttcttcatccaatt 5076
Query: 312 ttcccmtctggatttgacgacatattamttactgttctacactaacttatatgttagatg 371
|| || ||||||||||| ||||||||| ||| ||||||||| |||||| ||||| |||||
Sbjct: 5077 tttccatctggatttgatgacatattaattattgttctacattaacttgtatgtcagatg 5136
Query: 372 ttagayaccmaggagaacaccgtaagtygtttacttaactwgtcgwtctccaatttbctt 431
| ||| | | |||||| |||||||||| ||||||||| | |||| || ||||||| |
Sbjct: 5137 taaga-aacaaggagagcaccgtaagtaatttacttaattagtcgatcaccaatttaact 5195
Query: 432 atccttttttttcwttaacaactaccagtcagcntggcnttcaatttcgttaatactact 491
|||| ||| ||| ||||||||||| |||||| |||| | | || | |||||||||
Sbjct: 5196 atcc-atttattcattaacaactacaagtcagaatggcatctatttacaccaatactact 5254
Query: 492 aaccctctaggccaagcccctnctaccaaatatgatgaatatccattccaacaat 546
|||||||||||||||| |||| |||||||| |||||||||||||| ||||||||
Sbjct: 5255 aaccctctaggccaagtccctactaccaaacatgatgaatatccagcccaacaat 5309
>3x_Contig1585
Length = 11490
Score = 183 bits (90), Expect = 6e-46
Identities = 202/245 (82%), Gaps = 3/245 (1%)
Strand = Plus / Plus
Query: 166 ttgtwggagctcttctaaggcgccagttattgawccaatgctawatwagaagctgaagct 225
|||| || ||| |||||||||||||||||| || ||||||||| || |||||| ||||||
Sbjct: 1391 ttgtaggtgcttttctaaggcgccagttatcgaaccaatgctaaataagaagccgaagct 1450
Query: 226 gagacgaactaggrtcraggctgctgcgtttggtgattggaagcccaatctgaaaagtat 285
|||| |||||||| || ||||| | | |||||||| |||||| ||||||| ||||||||
Sbjct: 1451 gagaggaactaggatcaaggctacagagtttggtgcttggaaaaccaatctaaaaagtat 1510
Query: 286 athagtwgatggtttcttcmtccaattt-cccmtctggatttgacgacatattamttact 344
|| ||| || ||||||||| |||||||| ||| |||||||| | ||| |||| ||| |
Sbjct: 1511 ataagtagaaggtttcttcatccaattttcccatctggattcggttacacattaattatt 1570
Query: 345 gttctacactaacttatatgttagatgttagayaccmaggagaacaccgtaagtygttta 404
|||||||| |||||||| || |||| ||| || ||||||||||||||||| ||||
Sbjct: 1571 gttctacattaacttat--gtcagatagaagaaactaaggagaacaccgtaagtaattta 1628
Query: 405 cttaa 409
|||||
Sbjct: 1629 cttaa 1633
>3x_Contig1560
Length = 9209
Score = 173 bits (85), Expect = 7e-43
Identities = 158/187 (84%), Gaps = 1/187 (0%)
Strand = Plus / Minus
Query: 231 gaactaggrtcraggctgctgcgtttggtgattggaagcccaatctgaaaagtatathag 290
|||||||| || ||||| | ||||||| |||||||||||||||||| |||||||||| |
Sbjct: 2402 gaactaggatcaaggctacagcgtttgatgattggaagcccaatctaaaaagtatataac 2343
Query: 291 twgatggtttcttcmtccaat-ttcccmtctggatttgacgacatattamttactgttct 349
| || ||||||||| ||| || ||||| |||||||||||||||||| || | ||||||
Sbjct: 2342 tagaaggtttcttcatcctatcttcccctctggatttgacgacatactaatatttgttct 2283
Query: 350 acactaacttatatgttagatgttagayaccmaggagaacaccgtaagtygtttacttaa 409
||| ||| |||||||| |||||| ||| ||| ||||||||||||||||| |||||||||
Sbjct: 2282 acattaagttatatgtcagatgtaagaaaccaaggagaacaccgtaagtaatttacttaa 2223
Query: 410 ctwgtcg 416
| ||||
Sbjct: 2222 ttagtcg 2216
>3x_Contig1803
Length = 52241
Score = 142 bits (70), Expect = 1e-33
Identities = 85/94 (90%)
Strand = Plus / Minus
Query: 151 tgttgttccctggcgttgtwggagctcttctaaggcgccagttattgawccaatgctawa 210
||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| |
Sbjct: 51606 tgttgttccctggcgttgtaggagcacttctaaggcgccagttattgaaccaatgctaaa 51547
Query: 211 twagaagctgaagctgagacgaactaggrtcrag 244
| |||||||||||||| || |||||||| || ||
Sbjct: 51546 taagaagctgaagctgggatgaactaggatcaag 51513
>3x_Contig1701
Length = 10926
Score = 140 bits (69), Expect = 4e-33
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 151 tgttgttccctggcgttgtwggagctcttctaaggcgccagttattgawccaatgctawa 210
||||||| ||||||||||| ||||| ||||||||||||||||||||| |||||||| |
Sbjct: 5381 tgttgttacctggcgttgtaggagcagttctaaggcgccagttattgaaacaatgctaaa 5322
Query: 211 twagaagctgaagctgagacgaactaggrtcraggct 247
| |||||||||||||||||||||||||| || |||||
Sbjct: 5321 taagaagctgaagctgagacgaactaggatcaaggct 5285
>3x_Contig577
Length = 1642
Score = 124 bits (61), Expect = 3e-28
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 9 tctcttccccaatctattccgacaagcacwccgtgatgtgccgagaccccgaatctwcgg 68
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 1552 tctcttccccaatctattccgacaagcacaccgtgatgtgccgagaccccgaatctacgg 1611
Query: 69 ccagt 73
|||||
Sbjct: 1612 ccagt 1616
>3x_Contig1802
Length = 45229
Score = 120 bits (59), Expect = 6e-27
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 443 tcwttaacaactaccagtcagcntggcnttcaatttcgttaatactactaaccctctagg 502
|| ||||||||||| |||||| |||| | ||||| ||||||||||||||||||||||||
Sbjct: 45192 tcattaacaactacaagtcagaatggcatccaattacgttaatactactaaccctctagg 45133
Query: 503 ccaagcccctnctaccaaatatgatgaatatccattccaaca 544
|||||||||| |||||| | ||||||||||||| |||||||
Sbjct: 45132 ccaagcccctactaccatttttgatgaatatccagtccaaca 45091
Score = 110 bits (54), Expect = 6e-24
Identities = 101/120 (84%)
Strand = Plus / Minus
Query: 278 aaaagtatathagtwgatggtttcttcmtccaatttcccmtctggatttgacgacatatt 337
||||| |||| || |||||||||||| | ||||||||| | ||| |||||||||||||
Sbjct: 36174 aaaagaatataggtagatggtttcttcattcaatttcccattaggaattgacgacatatt 36115
Query: 338 amttactgttctacactaacttatatgttagatgttagayaccmaggagaacaccgtaag 397
| ||| |||||| || |||||||||||| | |||| ||| ||| ||||||||||||||||
Sbjct: 36114 aattattgttctgcattaacttatatgtcatatgtaagaaaccgaggagaacaccgtaag 36055
>3x_Contig1796
Length = 24558
Score = 114 bits (56), Expect = 4e-25
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 150 ttgttgttccctggcgttgtwggagctcttctaaggcgccagttattgawccaatgctaw 209
|||||||||||||||||||| ||||| ||||||||||||| ||||||| | |||||||
Sbjct: 8797 ttgttgttccctggcgttgtaggagcatttctaaggcgccaattattgaactaatgctaa 8738
Query: 210 atwagaagctgaagctgaga 229
|| |||||||||||||||||
Sbjct: 8737 ataagaagctgaagctgaga 8718
>3x_Contig1213
Length = 3226
Score = 110 bits (54), Expect = 6e-24
Identities = 77/86 (89%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 280 aagtatathagtwgatggtttcttcmtccaattt-cccmtctggatttgacgacatatta 338
|||||||| || |||||||||||| |||||||| ||| |||||||||||||||||||||
Sbjct: 93 aagtatatgggtagatggtttcttcatccaattttcccatctggatttgacgacatatta 34
Query: 339 mttactgttctacactaacttatatg 364
||| ||||||||| |||||||||||
Sbjct: 33 attattgttctacagtaacttatatg 8
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4180
Number of Sequences: 1807
Number of extensions: 4180
Number of successful extensions: 152
Number of sequences better than 1.0e-20: 13
length of query: 869
length of database: 10,358,551
effective HSP length: 16
effective length of query: 853
effective length of database: 10,329,639
effective search space: 8811182067
effective search space used: 8811182067
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (100.0 bits)